2024 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2014 | 2013 | 2011 | 2009

2024

Daniel SK, Sullivan KM, Dickerson LK, van den Bijgaart RJE, Utria AF, Labadie KP, Kenerson HL, Jiang X, Smythe KS, Campbell JS, Pierce RH, Kim TS, Riehle KJ, Yeung RS, Carter JA, Barry KC, Pillarisetty VG. "Reversing immunosuppression in the tumor microenvironment of fibrolamellar carcinoma via PD-1 and IL-10 blockade." Sci Rep. 2024 Mar 1;14(1):5109. doi: 10.1038/s41598-024-55593-6. PMID: 38429349; PMCID: PMC10907637.

2022

Combes AJ, Samad B, Tsui J, Chew NW, Yan P, Reeder GC, Kushnoor D, Shen A, Davidson B, Barczak AJ, Adkisson M, Edwards A, Naser M, Barry KC, Courau T, Hammoudi T, Argüello RJ, Rao AA, Olshen AB; Immunoprofiler Consortium; Cai C, Zhan J, Davis KC, Kelley RK, Chapman JS, Atreya CE, Patel A, Daud AI, Ha P, Diaz AA, Kratz JR, Collisson EA, Fragiadakis GK, Erle DJ, Boissonnas A, Asthana S, Chan V, Krummel MF. "Discovering dominant tumor immune archetypes in a pan-cancer census." Cell. 2022 Jan 6;185(1):184-203.e19. doi: 10.1016/j.cell.2021.12.004. Epub 2021 Dec 27. PMID: 34963056; PMCID: PMC8862608.

Mujal AM, Combes AJ, Rao AA, Binnewies M, Samad B, Tsui J, Boissonnas A, Pollack JL, Argüello RJ, Meng MV, Porten SP, Ruhland MK, Barry KC, Chan V, Krummel MF. "Holistic Characterization of Tumor Monocyte-to-Macrophage Differentiation Integrates Distinct Immune Phenotypes in Kidney Cancer." Cancer Immunol Res. 2022 Apr 1;10(4):403-419. doi: 10.1158/2326-6066.CIR-21-0588. PMID: 35181780; PMCID: PMC8982148.

Dinh TA*, Utria AF*, Barry KC*, Ma R, Abou-Alfa GK, Gordan JD, Jaffee EM, Scott JD, Zucman-Rossi J, O'Neill AF, Furth ME, Sethupathy P. "A framework for fibrolamellar carcinoma research and clinical trials." Nat Rev Gastroenterol Hepatol. 2022 May;19(5):328-342. doi: 10.1038/s41575-022-00580-3. Epub 2022 Feb 21. PMID: 35190728; PMCID: PMC9516439. *authors contributed equally.

Combes AJ, Samad B, Tsui J, Chew NW, Yan P, Reeder GC, Kushnoor D, Shen A, Davidson B, Barczak AJ, Adkisson M, Edwards A, Naser M, Barry KC, Courau T, Hammoudi T, Argüello RJ, Rao AA, Olshen AB; Immunoprofiler Consortium, Cai C, Zhan J, Davis KC, Kelley RK, Chapman JS, Atreya CE, Patel A, Daud AI, Ha P, Diaz AA, Kratz JR, Collisson EA, Fragiadakis GK, Erle DJ, Boissonnas A, Asthana S, Chan V, Krummel MF. "Discovering dominant tumor immune archetypes in a pan-cancer census." Cell. 2022 Jan 6;185(1):184-203.e19. doi: 10.1016/j.cell.2021.12.004. Epub 2021 Dec 27. PMID: 34963056; PMCID: PMC8862608.

2021

Minot SS, Barry KC, Kasman C, Golob JL, Willis AD. "geneshot: gene-level metagenomics identifies genome islands associated with immunotherapy response." Genome Biol. 2021 May 5;22(1):135. doi: 10.1186/s13059-021-02355-6. PMID: 33952321; PMCID: PMC8097837.

Peterson EE, Barry KC. "The Natural Killer-Dendritic Cell Immune Axis in Anti-Cancer Immunity and Immunotherapy." Front Immunol. 2021 Feb 3;11:621254. doi: 10.3389/fimmu.2020.621254. eCollection 2020. PMID: 33613552 

2020

Bald T, Krummel MF, Smyth MJ, Barry KC. "The NK cell-cancer cycle: advances and new challenges in NK cell-based immunotherapies." Nat Immunol. 2020 Aug;21(8):835-847. doi: 10.1038/s41590-020-0728-z. Epub 2020 Jul 20. PMID: 32690952.

2019

Binnewies M, Mujal AM, Pollack JL, Combes AJ, Hardison EA, Barry KC, Tsui J, Ruhland MK, Kersten K, Abushawish MA, Spasic M, Giurintano JP, Chan V, Daud AI, Ha P, Ye CJ, Roberts EW, Krummel MF. "Unleashing Type-2 Dendritic Cells to Drive Protective Antitumor CD4⁺ T Cell Immunity." Cell. 2019 Apr 18;177(3):556-571.e16. doi: 10.1016/j.cell.2019.02.005. Epub 2019 Apr 4. PMID: 30955881; PMCID: PMC6954108.

2018

Barry KC, Hsu J, Broz ML, Cueto FJ, Binnewies M, Combes AJ, Nelson AE, Loo K, Kumar R, Rosenblum MD, Alvarado MD, Wolf DM, Bogunovic D, Bhardwaj N, Daud AI, Ha PK, Ryan WR, Pollack JL, Samad B, Asthana S, Chan V, Krummel MF. "A natural killer-dendritic cell axis defines checkpoint therapy-responsive tumor microenvironments." Nat Med. 2018 Aug;24(8):1178-1191. doi: 10.1038/s41591-018-0085-8. Epub 2018 Jun 25. PMID: 29942093; PMCID: PMC6475503.

2017

De Leon JA, Qiu J, Nicolai CJ, Counihan JL, Barry KC, Xu L, Lawrence RE, Castellano BM, Zoncu R, Nomura DK, Luo ZQ, Vance RE. "Positive and Negative Regulation of the Master Metabolic Regulator mTORC1 by Two Families of Legionella pneumophila Effectors." Cell Rep. 2017 Nov 21;21(8):2031-2038. doi: 10.1016/j.celrep.2017.10.088. PMID: 29166595; PMCID: PMC5726772.

Barry KC, Ingolia NT, Vance RE. "Global analysis of gene expression reveals mRNA superinduction is required for the inducible immune response to a bacterial pathogen." Elife. 2017 Apr 6;6:e22707. doi: 10.7554/eLife.22707. PMID: 28383283; PMCID: PMC5407856.

2016

Starobinets H, Ye J, Broz M, Barry K, Goldsmith J, Marsh T, Rostker F, Krummel M, Debnath J. "Antitumor adaptive immunity remains intact following inhibition of autophagy and antimalarial treatment." J Clin Invest. 2016 Dec 1;126(12):4417-4429. doi: 10.1172/JCI85705. Epub 2016 Oct 24. PMID: 27775547; PMCID: PMC5127685.

2014

Grabiner MA, Fu Z, Wu T, Barry KC, Schwarzer C, Machen TE. "Pseudomonas aeruginosa quorum-sensing molecule homoserine lactone modulates inflammatory signaling through PERK and eI-F2α." J Immunol. 2014 Aug 1;193(3):1459-67. doi: 10.4049/jimmunol.1303437. Epub 2014 Jul 2. PMID: 24990083; PMCID: PMC4113911.

2013

Barry KC, Fontana MF, Portman JL, Dugan AS, Vance RE. "IL-1α signaling initiates the inflammatory response to virulent Legionella pneumophila in vivo." J Immunol. 2013 Jun 15;190(12):6329-39. doi: 10.4049/jimmunol.1300100. Epub 2013 May 17. PMID: 23686480; PMCID: PMC3682686.

2011

Barry KC, Abed M, Kenyagin D, Werwie TR, Boico O, Orian A, Parkhurst SM. "The Drosophila STUbL protein "Degringolade limits HES functions during embryogenesis." Development. 2011 May;138(9):1759-69. doi: 10.1242/dev.058420. PMID: 21486924; PMCID: PMC3074452.

Abed M, Barry KC, Kenyagin D, Koltun B, Phippen TM, Delrow JJ, Parkhurst SM, Orian A. "Degringolade, a SUMO-targeted ubiquitin ligase, inhibits Hairy/Groucho-mediated repression." EMBO J. 2011 Apr 6;30(7):1289-301. doi: 10.1038/emboj.2011.42. Epub 2011 Feb 22. PMID: 21343912; PMCID: PMC3094120.

Fontana MF, Banga S, Barry KC, Shen X, Tan Y, Luo ZQ, Vance RE. "Secreted bacterial effectors that inhibit host protein synthesis are critical for induction of the innate immune response to virulent Legionella pneumophila." PLoS Pathog. 2011 Feb;7(2):e1001289. doi: 10.1371/journal.ppat.1001289. Epub 2011 Feb 17. PMID: 21390206; PMCID: PMC3040669.

2009

Liu R, Abreu-Blanco MT, Barry KC, Linardopoulou EV, Osborn GE, Parkhurst SM. "Wash functions downstream of Rho and links linear and branched actin nucleation factors." Development. 2009 Aug;136(16):2849-60. doi: 10.1242/dev.035246. PMID: 19633175; PMCID: PMC2730411.