Companies
AbCam
Agilent
American Type Culture Collection
BioRad
Eppendorf
Cold Spring Harbor Laboratory
Covance
Cytiva (GE life Sciences]
GraphPad Software
IDT (Integrated DNA Technologies)
MilleporeSigma (emd millipore)
New England Biolabs
Novus Biologicals
Promega
Sigma-Aldrich (emd millipore)
ThermoFisher
TriLink BioTechnologies
Worthington Biochemical Corp.
Structural Biology Resources
Cramer Lab Structural Biology Movies
DisProt (disorder prediction)
Max-Plank Institute Bioinformatics Toolkit
Metapredict (disorder prediction)
MolProbity
PDB file manipulation software
PROSS (protein repair)
Protein Data Bank (retrieve structure coordinates)
PSIPRED (Protein Secondary Structure Prediction Server)
Uniprot
Yeast Resources
ADpred (acidic transcription activation domain analysis)
Horizon Yeast Resources (previously Dharmacon)
Pringle Plasmid oligos F2, R1 and PCR check
Yeast Genome.org (SGD)
Yeastract (promoter and transcription factor database)
YeasTSS (transcription start site and related database)
Genome Database Search
ADpred (acidic transcription activation domain analysis)
Blast Search (NCBI)
Clustal Omega
Conserved Domain Database NCBI
European Bioinformatics Institute
ExPASY Bioinformatics Tools
Metapredict V2 (protein disorder)
NCBI
OrthoDB (catalog of Euk Orthologs)
PROMALS3D (multiple sequence and structure alignment)
Protein Data Bank
T-Coffee sequence alignment tools
UniProt database (search and retrieve proteins)
Journals
Cell
Cell Reports
Current Biology
eLife
EMBO Journal
EMBO Reports
Genes and Development
Genetics
Journal of Biological Chemistry
Journal of Molecular Biology
Molecular and Cellular Biology
Molecular Cell
Nature
Nature Communications
Nature Structural and Molecular Biology
Nucleic Acids Research
PLOS Biology
PNAS
Science
Transcription
Miscellaneous
Calculate Ca/Mg/ATP/EGTA concentrations
ThermoFisher (Sorvall) Rotor Speed Calculator
Centrifuge Rotor Speed Calculator (various brands)
Crystal Mountain
Crystal Mountain Weather Forecast (NOAA)
Maxchelator and other related programs
Mt Rainier National Park
Oligo Tm and other BioMath
Seattle Attractions
Seattle Mariners
Seattle Seahawks
Seattle Street Cameras
Seattle Streetcar
Stevens Pass
Video: John Lis 2018 "regulation by transcriptional pausing"
Video: Patrick Cramer "eukaryotic transcription: mechanisms and regulation"
Videos: Fragle Nucleosome lectures
Video: Mark Ptashne "Specificity"
Video: Mark Ptashne "Genetic Switches"
Video: Race for the Repressor (with Mark Ptashne and Walter Gilbert et al.)
Video: Hal Weintraub "Genes and Differentiation"
Washington Trails Association
Whistler Blackcomb